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Figure 3B from An Integrative Analysis of microRNA and mRNA Expression - A Case Study Published in Cancer Informatics
By Vasilis Promponas
Full title: GRANATUM: a social collaborative working space semantically interlinking biomedical researchers, knowledge and data for the design and execution of in-silico models and experiments in cancer chemoprevention
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"Biology, Translational Pharmacology & Toxicology Computation" Online Course at Udemy
www.udemy.com/biology-translational-pharmacology-toxicolo...
Description
Compared with conventional reductionist track that tries to demonstrate complicated ailments by examining human gene, Systems Biology is described by the vision that the implied mechanism of complicated ailments is likely to become the dysregulation of diverse interconnected cellular paths.
With the development of technology and science, Translational Pharmacology has developed as a modern branch to face today’s healthcare requirement and is believed as an expansion of clinical pharmacology.
Pharmacogenetics survey for the target of medication improvement has, in the past, concentrated almost completely on the impact of differences in human genes for giving rise to a particular adverse effect.
Computational Toxicology is actually a vibrant and quickly improving branch that combines data and information from a diversity of sources to improve mathematical and computer-founded models to better recognize and foresee adverse health impacts caused via chemicals, like pharmaceuticals and environmental pollutants.
A perfect ontology should authorize the mapping of datum at different standards of hierarchy. Computational designing of biological frameworks can accomplish combination along various dimensions.
In Summary, Bricolage is actually a methodological procedure that, in case of a public situation, alters and develops not only while but for the sake of the course activity. To do this demands a track of (Biology-Transnational Pharmacology-Toxicology Computation) as an interdisciplinarity approach where habitual disciplinary borders are not merely crossed but the analytical scopes of these diverse disciplines are actively used.
Who this course is for:
People from whole of the world, who have an interest in the following approaches: 1) Biology, 2) Translational Pharmacology, 3) Computational Toxicology, 4) Pharmacogenetics, 5) Computational Modeling Tactics, 6) The Art of Literature, 7) Chemical Biology, 8) Biochemistry, 9) Cheminformatics, 10) Bioinformatics, and 11) Biomedicine. And this course contains thirty-nine resource.
By Maram Abdel Nasser Taha Shtaya
Pharmacist, American Studies Instructor, Author and Researcher who is teaching on Udemy.
Free Preview Lecture
"Biology, Translational Pharmacology & Toxicology Computation" Online Course at Udemy
www.udemy.com/biology-translational-pharmacology-toxicolo...
Description
Compared with conventional reductionist track that tries to demonstrate complicated ailments by examining human gene, Systems Biology is described by the vision that the implied mechanism of complicated ailments is likely to become the dysregulation of diverse interconnected cellular paths.
With the development of technology and science, Translational Pharmacology has developed as a modern branch to face today’s healthcare requirement and is believed as an expansion of clinical pharmacology.
Pharmacogenetics survey for the target of medication improvement has, in the past, concentrated almost completely on the impact of differences in human genes for giving rise to a particular adverse effect.
Computational Toxicology is actually a vibrant and quickly improving branch that combines data and information from a diversity of sources to improve mathematical and computer-founded models to better recognize and foresee adverse health impacts caused via chemicals, like pharmaceuticals and environmental pollutants.
A perfect ontology should authorize the mapping of datum at different standards of hierarchy. Computational designing of biological frameworks can accomplish combination along various dimensions.
In Summary, Bricolage is actually a methodological procedure that, in case of a public situation, alters and develops not only while but for the sake of the course activity. To do this demands a track of (Biology-Transnational Pharmacology-Toxicology Computation) as an interdisciplinarity approach where habitual disciplinary borders are not merely crossed but the analytical scopes of these diverse disciplines are actively used.
Who this course is for:
People from whole of the world, who have an interest in the following approaches: 1) Biology, 2) Translational Pharmacology, 3) Computational Toxicology, 4) Pharmacogenetics, 5) Computational Modeling Tactics, 6) The Art of Literature, 7) Chemical Biology, 8) Biochemistry, 9) Cheminformatics, 10) Bioinformatics, and 11) Biomedicine. And this course contains thirty-nine resource.
By Maram Abdel Nasser Taha Shtaya
Pharmacist, American Studies Instructor, Author and Researcher who is teaching on Udemy.
BecA-ILRI Hub researcher Mark Wamalwa explains the BecA bioinformatics platform and the high-throughput virus detection and pathogen discovery project.
Photo Credit: BecA-ILRI/Tim Hall
Belgium - Brussels - 10 March 2014 - Innovation Convention 2014 - Hearing your genes evolve - Deirdre GRIBBIN , Composer - Sarah TEICHMANN , Research Group Leader at EMBL-European Bioinformatics Institute and Wellcome Trust Sanger Institute ©EC/CE
Belgium - Brussels - 10 March 2014 - Innovation Convention 2014 - Hearing your genes evolve - Deirdre GRIBBIN , Composer - Sarah TEICHMANN , Research Group Leader at EMBL-European Bioinformatics Institute and Wellcome Trust Sanger Institute ©EC/CE
Free Preview Lecture
"Biology, Translational Pharmacology & Toxicology Computation" Online Course at Udemy
www.udemy.com/biology-translational-pharmacology-toxicolo...
Description
Compared with conventional reductionist track that tries to demonstrate complicated ailments by examining human gene, Systems Biology is described by the vision that the implied mechanism of complicated ailments is likely to become the dysregulation of diverse interconnected cellular paths.
With the development of technology and science, Translational Pharmacology has developed as a modern branch to face today’s healthcare requirement and is believed as an expansion of clinical pharmacology.
Pharmacogenetics survey for the target of medication improvement has, in the past, concentrated almost completely on the impact of differences in human genes for giving rise to a particular adverse effect.
Computational Toxicology is actually a vibrant and quickly improving branch that combines data and information from a diversity of sources to improve mathematical and computer-founded models to better recognize and foresee adverse health impacts caused via chemicals, like pharmaceuticals and environmental pollutants.
A perfect ontology should authorize the mapping of datum at different standards of hierarchy. Computational designing of biological frameworks can accomplish combination along various dimensions.
In Summary, Bricolage is actually a methodological procedure that, in case of a public situation, alters and develops not only while but for the sake of the course activity. To do this demands a track of (Biology-Transnational Pharmacology-Toxicology Computation) as an interdisciplinarity approach where habitual disciplinary borders are not merely crossed but the analytical scopes of these diverse disciplines are actively used.
Who this course is for:
People from whole of the world, who have an interest in the following approaches: 1) Biology, 2) Translational Pharmacology, 3) Computational Toxicology, 4) Pharmacogenetics, 5) Computational Modeling Tactics, 6) The Art of Literature, 7) Chemical Biology, 8) Biochemistry, 9) Cheminformatics, 10) Bioinformatics, and 11) Biomedicine. And this course contains thirty-nine resource.
By Maram Abdel Nasser Taha Shtaya
Pharmacist, American Studies Instructor, Author and Researcher who is teaching on Udemy.
Conceived as the cornerstone of a much broader vision to build up the biomedical sciences industry in Singapore, the Biopolis is a purpose-built biomedical research hub where researchers from the public and private sectors are co-located. Situated in the south-western part of Singapore, the Biopolis is within walking distance of the Buona Vista MRT Station and is near both the National University of Singapore and the National University Hospital.
Developed by JTC Corporation at a cost of S$500 million, Phase 1 of Biopolis comprises a seven-building complex linked by skybridges and offers a built-up area of 185,000 sqm. Two buildings, Chromos and Helios, are dedicated to biomedical players from the private sector. The other five (Centros, Genome, Matrix, Nanos and Proteos) house the biomedical research institutes of the Agency of Science, Technology and Research (A*STAR), Singapore's lead agency for scientific research and development under the aegis of the Ministry of Trade and Industry. The five research institutes are the BioInformatics Institute (BII), the Bioprocessing Technology Institute (BTI), the Genome Institute of Singapore (GIS), the Institute of Molecular and Cell Biology (IMCB) and the Institute of Bioengineering & Nanotechnology (IBN).
At steady state, a fully occupied Biopolis in Phase 1 will be home to 2,000 scientists. This research community is fully supported by state-of-the-art infrastructure including shared resources and services catering to the full spectrum of R&D activities and graduate training.
The Biopolis is part of a master plan for a much larger 200-hectare development known as one-north and there are provisions for expansion to cater to a growing demand from biotech companies. Occupancy at Biopolis Phase 1 now stands at 90% and development of Biopolis Phase 2 which will be completed by end 2007 will add another 37,000 sqm of built-up area.
A GraphViz visualisation of a very simple workflow (just one "Web service") that can be executed with the Taverna workbench.
SRS links is a service can be used to map between different identifiers used to identify biological sequences (e.g. DNA, Protein) in different databases. This particular workflow maps from SWISSPROT ID:Q49SH1 to EMBL ID:AY581204 (and others). The databank parameter specifies the database to search, e.g. uniprot, the fieldname parameter specifies which fields to search e.g. AllText searches all fields and finally the xref_databank parameter specifies the target database to map to e.g. embl. As well as outputtting an EMBL_id the service produces a report on the operation. See e.g. www.ebi.ac.uk/~srs/, srs.ebi.ac.uk or Taverna for more details.
SWISS2EMBL is just one mapping the service can perform, there are many others, because (molecular) biology is drowning in databases...
workflow available from www.cs.man.ac.uk/~hulld/workflows/identifier_mapping_with...
Belgium - Brussels - 10 March 2014 - Innovation Convention 2014 - Hearing your genes evolve - Deirdre GRIBBIN , Composer - Sarah TEICHMANN , Research Group Leader at EMBL-European Bioinformatics Institute and Wellcome Trust Sanger Institute ©EC/CE
Figure 1 from Structural and Functional Insights on the Myosin Superfamily Published in Bioinformatics and Biology Insights
Participants from 13 eastern and central African countries attend the BecA-ILRI Hub annual Advanced Bioinformatics workshop 18-29 August 2014, ILRI, Nairobi. (photo credit: BecA-ILRI Hub/Marvin Wasonga)
A team of eight scientists from the Addis Ababa University received a tailor-made training in molecular biology, genomics and bioinformatics at the Biosciences eastern and central Africa-International Livestock Research Institute (BecA-ILRI) Hub in Nairobi From 17-28 August 2015 (photo: BecA-ILRI Hub\Marvin Wasonga)
Figure S1A from A Novel Multi-Scale Modeling Approach to Infer Whole Genome Divergence Published in Evolutionary Bioinformatics
Figure 1B from Electrostatic and Functional Analysis of the Seven-Bladed WD β-Propellers Published in Evolutionary Bioinformatics
Figure 2 from Classifying Variants of Undetermined Significance in BRCA2 with Protein Likelihood Ratios Published in Cancer Informatics
Figure 4 from Surface Adjustment of Reverse Phase Protein Arrays using Positive Control Spots Published in Cancer Informatics
Free Preview Lecture
"Biology, Translational Pharmacology & Toxicology Computation" Online Course at Udemy
www.udemy.com/biology-translational-pharmacology-toxicolo...
Description
Compared with conventional reductionist track that tries to demonstrate complicated ailments by examining human gene, Systems Biology is described by the vision that the implied mechanism of complicated ailments is likely to become the dysregulation of diverse interconnected cellular paths.
With the development of technology and science, Translational Pharmacology has developed as a modern branch to face today’s healthcare requirement and is believed as an expansion of clinical pharmacology.
Pharmacogenetics survey for the target of medication improvement has, in the past, concentrated almost completely on the impact of differences in human genes for giving rise to a particular adverse effect.
Computational Toxicology is actually a vibrant and quickly improving branch that combines data and information from a diversity of sources to improve mathematical and computer-founded models to better recognize and foresee adverse health impacts caused via chemicals, like pharmaceuticals and environmental pollutants.
A perfect ontology should authorize the mapping of datum at different standards of hierarchy. Computational designing of biological frameworks can accomplish combination along various dimensions.
In Summary, Bricolage is actually a methodological procedure that, in case of a public situation, alters and develops not only while but for the sake of the course activity. To do this demands a track of (Biology-Transnational Pharmacology-Toxicology Computation) as an interdisciplinarity approach where habitual disciplinary borders are not merely crossed but the analytical scopes of these diverse disciplines are actively used.
Who this course is for:
People from whole of the world, who have an interest in the following approaches: 1) Biology, 2) Translational Pharmacology, 3) Computational Toxicology, 4) Pharmacogenetics, 5) Computational Modeling Tactics, 6) The Art of Literature, 7) Chemical Biology, 8) Biochemistry, 9) Cheminformatics, 10) Bioinformatics, and 11) Biomedicine. And this course contains thirty-nine resource.
By Maram Abdel Nasser Taha Shtaya
Pharmacist, American Studies Instructor, Author and Researcher who is teaching on Udemy.
Figure S3.6 from Major Functional Transcriptome of an Inferred Center Regulator of an ER(-) Breast Cancer Model System Published in Cancer Informatics
More gibberish from another whiteboard. The people right outside my office like to work on this kind of stuff.
From: www.connectedaction.net
Top Twitter users who recently tweeted the words bioinformatics
when queried on April 27, 2011, sorted by betweenness centrality.
A network map of this data is here: www.flickr.com/photos/marc_smith/5663118647/sizes/o/
Top most between users:
@bioinfo
@kshameer
@biomol_info
@genegeek
@32nm
@yokofakun
@marina_manrique
@pathogenomenick
@hannahjwaters
@kristiholmes
Graph Metric: Value
Graph Type: Directed
Vertices: 258
Unique Edges: 419
Edges With Duplicates: 50
Total Edges: 469
Self-Loops: 0
Connected Components: 174
Single-Vertex Connected Components: 163
Maximum Vertices in a Connected Component: 74
Maximum Edges in a Connected Component: 450
Maximum Geodesic Distance (Diameter): 6
Average Geodesic Distance: 2.465133
Graph Density: 0.006696227
NodeXL Version: 1.0.1.166
NodeXL is free and open and available from www.codeplex.com/nodexl
NodeXL is developed by the Social Media Research Foundation (www.smrfoundation.org) - which is dedicated to open tools, open data, and open scholarship.
The book, Analyzing social media networks with NodeXL: Insights from a connected world, is available from Morgan Kaufmann and from Amazon.
Marc Smith on Twitter.
Figure 4 from Computational Design of Targeted Inhibitors of Polo-Like Kinase 1 (Plk1) Published in Bioinformatics and Biology Insights
Figure 3 from Functional Evolution of BRCT Domains from Binding DNA to Protein Published in Evolutionary Bioinformatics
Figure 2 from An Integrative Analysis of microRNA and mRNA Expression - A Case Study Published in Cancer Informatics
We had an enjoyable (well, at least I liked it!) session with MBI students and teachers.
Exactum, Kumpula, Helsinki 25.3.2010