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15 February 2016, Rome, Italy - Gunter Pauli, Founder, Zero Emissions Research and Initiatives Network, Japan. FAO International Symposium on “The Role of Agricultural Biotechnologies in Sustainable Food Systems and Nutrition”, Opening Session. FAO headquarters (Green room).

 

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Global Forum on Biotechnology - The Evolving Promise of the Life Sciences

12 November 2012

OECD Conference Centre, Paris

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A student works in a biotechnology lab in Halsey Science Center at UW Oshkosh.

The BIO World Congress on Industrial Biotechnology is the world’s largest industrial biotech gathering which brings together business executives, government officials, researchers and industry leaders from over 35 countries. This year's event was held in Orlando, Florida from April 29 – May 2, 2012 at the Gaylord Palms

Nina Federoff speaking at the International Association of Plant Biotechnology (IAPB) 2014 Congress in Melbourne, Victoria, Australia.

 

JAMSHID RAHEB

9041 YONGE ST,

RICHMOND HILL,

ON, CANADA,

L4C 0L2

jamshid_raheb@yahoo.com

jam@nigeb.ac.ir

(905)886-2338

(416) 587-3032

 

:

Enclosed please find my resume;

I graduated from the University of Warwick from United Kingdom in May 1998 with a PhD Degree in molecular microbiology. My major was Genetic Engineering. As you will see from my resume, in addition to meeting the demands of a full-time academic schedule, I have also accumulated fifteen years of experience in biotechnology research.

Sincerely,

 

Jamshid Raheb

                          

Jamshid Raheb

 

PersonalDate and Place of Birth: March 17-1962 – Tehran – IRAN

Marital Status: Single

ObjectiveSearching, learning and teaching

Education

                                         

Research work

                        

Ph. D in Molecular Microbiology

1994-1998 The University of Warwick ,U.K. ENGLAND

 

-Thesis: The molecular and physiological effects of starvation and other stresses on

Flexibacter chinensis

Average grade: A+

 

For many years physiological, morphological and particularly molecular studies on

gliding bacteria were impossible due to the lack of a suitable technique for the genetic

manipulation of this group of bacteria including Flexibacter chinensis. Our study has focused

on the physiological and morphological changes in molecular level in this organism during

the transition from the exponential to stationary phase of growth, and during long -term stress

condition. Our data demonstrate that there is a dramatic change in respiration activity and

enzymes during the stationary phase which can not be seen in the exponential phase.

Parallel to this bacterial morphology changes with a particularly noticeable size

reduction in this usually filamentous bacterium. With the collaboration of Wisconsin

University in USA we have developed a method for the molecular study of this group of bacteria.

We have constructed two mutants for the genes which produce two novel sigma factors, KatF(sS)

and RpoH(s32), and have investigated the effect of these mutants with respect to cell size

changes during the transition from growth to starvation conditions and under heat stress.

The mutants were unable to change from the filamentous to coccoidal form and consequently

were unable to survive stress as effectively as the parental strain which could undergo

morphological changes. Our data have demonstrated the importance of cell division in

Flexibacter chinensis for the survival of this bacterium under stress conditions.

  

Master of Science (M.Sc) in Bacteriology

1987-1991, Tarbiat Modarres University, Tehran, IRAN

Average grade: 17.62 / 20

-Thesis: Investigation of fastidious E. coli in the urinary tract infections

Thesis Grade: 19.50 / 20

Bachelor of Science in Biology (B.Sc) in Microbiology

Aug. 1983 – Jul. 1987, Tehran University , Tehran, IRAN

Average grade: 17.60 / 20

   

The Microbial sulfur-specific transformation which selectively desulfurize organic sulfur compounds in fossil fuels, has been identified. We have Identified, Isolated, cloned and sequenced a 4kb gene locus from a newly isolated Iranian strain Rhodococcus FMF(4S pathway genes) on a broad host range plasmid with integration ability in chromosome of gram negative bacteria. This was reported for the first time as chromosomal conserved dsz genes from 4S pathway in Rhodococcus which these genes recorded in EMBL(1,2,3,4). This organized as one operon with three genes (dszA, dszB and dszC)under the control of single promoter. The dsz gene from this new strain has been cloned under control of tac promoter in different pseudomonas solvent tolerant species(ATCC 9027). We have applied an industrial microorganism , with the ability in biological desulfurization. In this way, using molecular and microbiological techniques we successfully constructed a manipulated bacterium with two relevant industrial application, that is biosurfactant production and desulfurization of fossil fuel. I have selected a strain of pseudomonas. Sp. which is producing biosurfactants which can help the desulfurization process by accelerating phase separation. In this regard I have cloned Rhodococcus Erytheropolis(IGTS8) desulfurization operon with a heterologues promoter(tac) in this pseudomonas strain. The resulted construct has three industrial traits. First, it has an enhanced desulfurization activity due to the exchange of native promoter with heterologues tac promoter. Second, it can produce biosurfactants which in turn help to desulfurization process by enhancing phase separation. Third, as pseudomonas Sp. is the most known solvent tolerance bacteria, this construct has the advantage to be used in industrial operation. In further step I am going to conduct a research on likely interactions between Rhamnolipid biosurfactants and oil components. Further researches is in progress to find out the influence of the biosurfactants on DBT desulfurization. By the way I am to appreciate the close cooperation of Dr Diaz from Spain. This is the new alternatives to commercialize the biodesulfurization of crude oil processes.

LanguagesEnglish, Turkish and Farsi.

Skills

  

Molecular cloning, Polymerase chain reaction (PCR), DNA sequencing, Southern hybridization, Northern hybridization, Western blots, DNA separation techniques, Two-dimensional gel electrophoresis (2D Gels) DNA library, Over-expression of proteins, MALDI-TOF.

Work Experience

  

National Institute for Genetic Engineering and Biotechnology (NIGEB) of IRAN. March 1998 – 2007 (Dept. of Microbiology), Member of Faculty Board ,

Principal Investigator (PI) several research projects

Teaching the course units related to Molecular Microbiology and Biotechnology

Workshop attended“Good Laboratory Practice (GLP)”, NIGEB, Sep.(17-19) 2000, Tehran-IRAN

“Cloning in bacterial expression system for production of recombinant protein” Organized by

NIGEB, Jan (18-22) 2003. Tehran- IRAN

“Application of Enzymes in Biotechnology” Organized by NIGEB, Dec (23-27)

2006. Tehran – IRAN

Papers1- Raheb, J. and Yakhchali, B. (2002). Genetic analysis of biodesulfurizing bacteria isolated

in IRAN. Journal of Sciences IslamicRepublic of Iran, 11, No 3 and 4, 1-12.

 

2- Akbarzadeh, A., Raheb, J., Aghaei, E. and Karkhane, A. (2003). Study ofDesulfurization rate

in Rhodococcus FMF Native Bacterium, Iranian Journal of Biotechnology , 1, 1, 36-40.

   

3- Kazemi, M and Raheb, J. (2004), Isolation and Identification of a Sulfide/Sulfoxide

Monooxigenase Gene from a Newly Isolated Rhodococcus Sp, Strain FMF. Journal of Sciences,

Islamic Republic of Iran, 15, 2, 119-126.

 

4- Naghdi, S., Raheb, J., Yakhchali, B. and Aghaei, E. (2004). Cloning of Desulfurization Operon

of 4S pathway in Pseudomonas.(In Persian Language), Journal of Science ( Tehran University),

30, 389-391.

 

5- Akbarzadeh, A., Raheb, J., Rastegar, Jazi, (2004). Cloning and sequencing of desulfurization

Operon from a Newly Isolated Bacterium Rhodococcus FMF, Iranian Journal of Biotechnology ,

Vol 2, No.1, 19-24

 

6- Raheb, J., Yektamaram, L., Shaabani, A., Akbari, M and Aghaei, E.(2004), Isolation and

cloning of Glocose oxidase gene from Aspergillus niger In Ecoli. Koomesh Journal of semnan

University of Medical Sciences, 5, 1&2, 29-36.

 

7- Akbarzadeh, A., Raheb (2004). Identification and Cloning of desulfurization Operon (dszAB)

from a Native Bacterium Rhodococcus FMF, . Koomesh Journal of semnan University of

Medical Sciences, Spring & Summer 2004,Vol.5, No. 3&4, 171-178.

 

8- Raheb, J., Mohaghegh. A., Akbari, M., Shabani,and Aghaee, E (2005). Cloning of

Glucose oxidase gene in pkk233-3. . Koomesh Journal of semnan University of

Medical Sciences, Vol 6, No 3, 217-222.

 

9- Raheb, J., Naghdi, S., Yakhchali, B., (2005). Designing a new Recombinant strain with

additional copy number to enhance biodesulfurization activity in Pseudomonas

aeruginosa ATCC9027. Iranian Journal of Science & Technology, 29, 195-199.

 

10- Raheb, J., Karkhane, A.A., Naghdi, S., Flint, K., (2005). The mutation of the rpoS gene,

the central regulator of stationary phase, affects the cell division in Flexibacter chinensis,

Journal of Sciences,16, 209-215.

 

11- Raheb, J. Naghdi, S. and Flint, K.P. (2006). "De novo protein production under long

term starvation in Flexibacter chinensis". Mendez-Vilas, Proceedings Book titled "Modern

Multidisciplinary Applied Microbiology, 50-54.

 

12- Raheb, J., Aghaei, E. S., Ghorbanli, M., Khanyeki, G., and Naghdi,(2006).

Identification and cloning of oxidoreductase gene from Rhodococcus erythropolis in

E.coli. Koomesh Journal of semnan University of Medical Sciences, 6, 4, 325-334.

 

13- Raheb, J. Naghdi, S. and Flint, K.P. (2006). Alkaline phosphatase activity of Flexibacter

chinensis under starvation stress in strile water microcosoms. special issue of the Enzyme and

Microbial Technology journal, 40, 13-16.

 

14- Raheb, J., Naghdi, S. and Flint, K.(2006). The effect of starvation factor on the survival

characteristics of Flexibacter chinensis, Iranian Journal of Science & Technology.

Transaction A. Vol. 31, No. A1, 117-121

 

15- Raheb, J., Naghdi, S. and Flint, K.(2006). The effect of some environmental factors

on the survival characteristics of Flexibacter chinensis. Journal of Sciences.

Islamic Republic of Iran, 17, 2, 317-322.

 

16- Raheb, J., Naghdi, S. and Flint, K.(2007). Respiration Activity in Flexibacter chinensis under

Starvation Stress, Iranian Journal of Science & Technology. Transaction A, Vol. 31, No.A3, 1-10

  

17- Raheb, J., Naghdi, S. Karkhane, A.A., Yahkchali , B., and Flint, K.P. (2004).

nucleotide sequence of dszC Gene from a Newly Isolated Rhodococcus FMF, Shiraz

E -Medical Journal, 5, 2.

 

18- Raheb, J., Naghdi, S. and Flint, K. (2006). Heat-Induced Synthesis of δ32 in Flexibacter

chinensis: The Role and Function in cell division, Journal of Chemistry and Chemical

Engineering, 18, 2, 115-121.

 

19- Raheb, J., Naghdi, S. and Flint, K.(2008). The effect of starvation stress on the protein profiles in

Flexibacter chinensis. Iranian biomedical Journal .12, 2, 67-77

 

20- Akbari Noghabi, K., Shahbani Zahiri, H., Raheb, J., Nasri, S. and Chul Yun, S.(2007).

The Survey of Mercury Obsorption by pseudomonas flourescens BM07 grown at two different

Temperature, Microbiological Research, 56, NO 2, 111-117.

 

21- Raheb, J., khoshroo., H , Nasernejad., B, Sanati., M,H, Azimi., A, Naghdi., S. and

Arabnezhad., M..(2006). Isolation and Characterization of a new Acidothiobacillus

Thiooxidans from the Aliabad copper mine in Yazd using 16s-23s spacer gene nucleotide

sequencing method, Journal of Chemistry and Chemical Engineering.

 

22- Raheb, J., khoshroo, H., Nasernejad, B., Sanati, MH., Azimi, A., Naghdi,

S. and Arabnezhad, M..(2007). Isolation and Characterization of a new Acidothiobacillus

Ferrooxidans from the Aliabad copper mine in Yazd using 16s-23s spacer gene nucleotide

sequencing method, Journal of Sciences, Islamic Republic of Iran, 18(3): 209-213

 

23- Barzegar, F., Raheb. J. and Mosavi, M.L. (2007). Cloning and expression of SOX(dsz A B, C)

Operon in Ecoli Strain DH5a and comparison its desulfurization activity with pseudomonas aeroginosa

EGSOX, Pseudomonas putida EGSOX and Ecoli cc118 lambda pir,. Koomesh Journal of semnan University

of Medical Sciences, Spring & Summer 2007,Vol.8, No. 2, 1-15.

 

24- Raheb, J., Aghaei, E. S. and Behzadi, H,(2008), Enhansment of Biodesulfurization activity via the overexpression of the oxidoreductase gene from R.Eytheropolis IGTS8 using pet21a vector, Koomesh Journal of semnan University

of Medical Sciences, Winter 2008,Vol.9, No. 2, 1-15, 99-105.

 

25- Shourian, M., Akbari Noghabi, K., Shahbani Zahiri, H., Bagheri, T., Karballaei, G.,

Mollaei, M., Rad, I., Ahadi, S., Raheb. J. and Abbasi, H. (2008). DES 5233 Efficient

Phenol-degradation by a newly characterized Pseudomonas sp. SA01 isolated from pharmaceutical

Wastewaters. Desalination Journal

 

Presentations1- Raheb, J., Aghaei, E., Naghdi, S. and Yakhchali, B. (2001). Cloning and Expression of

desulfurization Operon in Pseudomonas aeroginusa to Enhance Biodesulfurization Rate in Fossil

Fuels, 2th National Biotechnology Congress IslamicRepublicof Iran, Oct. 9-11 2001, Karaj

Agricultural Biotechnology Research Institute of Iran

 

2- Hosseini, Sayyedabolfazl., Yakhchali, B., Sattari. Morteza and Raheb, J. (2001). Cloning of

DNA Fragment Encoding NSP4 Epitope of Rotavirusin CS3Fimberial Subunit Gene of

Enterotoxigenic E.coli, 2th NationalBiotechnology Congress IslamicRepublicof Iran, Oct.

9-11 2001, Karaj Agricultural Biotechnology Research Institute of Iran

 

3- Raheb, J. and Yakhchali, B. (2002). Genetic analysis of biodesulfurizing bacteria isolated in

IRAN. Ninth Iranian Biology Conference, Faculty of Science, University of Tehran, 15-17 August 2000.

 

4- Raheb, J., Akbarzadeh, S. and Flint, K.P. (2003). Consevation of chromosomal-Encoded

Dibenzothiophene desulfurization genes in a newly Isolated Bacterium Rhodococcus FMF.

10th Iranian Researchers seminar in Europe (IRSE2003), Gonville and Cauis college University

of Cambridge Cambridge 31 May, 2003

 

5- Akbarzadeh, A., Raheb, J., Aghaei, E. and Karkhane, A. (2003). Study and Compare of

Desulfurization rate in Rhodococcus FMF Native Bacterium, 7th National Iran chemical

Engineering Congress, University of Tehran 28-31 October, 2002

 

6- Raheb, J., Aghaei, E. and Naghdi, S. (2004). Identification and Cloning of

Oxidoreductase gene from Rhodococcus Erytheropolis, Proceedings of The 12th Iranian biology

Conference.

 

7- Raheb, J., Karkhane, A. and Flint, K.P. (2004). Alkaline phosphatase activity of Flexibacter

chinensis under starvation stress in strile water microcosoms. 1tst International Conference on

Environmental , Industrial and Applied Microbiology(BioMicroWorld-2005). March

5-18th 2005, Badajoz, Spain

 

8- Raheb, J., Karkhane, A. and Flint, K.P. (2004). The effect of stress on the protein profiles in

Flexibacter chinensis. 1tst International Conference on Environmental , Industrial and

Applied Microbiology(BioMicroWorld-2005). March 15-18th 2005, Badajoz, Spain.

 

9- Raheb, J., Karkhane, A. and Flint, K.P. (2004). Heat-Induced Synthesis of δ32 in

F. chinensis: The Role and Function in cell Division . 1tst International Conference

on Environmental , Industrial and Applied Microbiology(BioMicroWorld-2005).

March 15-18th 2005, Badajoz, Spain.

 

10- Raheb, J., Karkhane, A. and Flint, K.P. (2004). Respiration Activity in Flexibacter chinensis

under Starvation Stress 1tst International Conference on Environmental , Industrial and

Applied Microbiology(BioMicroWorld-2005). March 15-18th 2005, Badajoz, Spain.

 

11- Raheb, J., Karkhane, A. and Flint, K.P. (2004). The mutation of the ropS gene, the central

regulator of stationary phase, affects the cell division in F. chinensis 1tst International

Conference Environmental Industrial and Applied Microbiology(BioMicroWorld-2005). March

15-18th 2005, Badajoz, Spain.

 

12- Raheb, J., Karkhane, A. and Flint, K.P. (2004). The effect of environmental factors on

the survival characteristics of Flexibacter chinensis. 1tst International Conference

on Environmental , Industrial and Applied Microbiology(BioMicroWorld-2005).

March 15-18th 2005, Badajoz, Spain.

 

13- Raheb, J., Aghaei, E., Khaniki, GH.. Ghorbanly, M. and Naghdi, S. (2005). Identification

and Cloning of Oxidoreductase gene from Rhodococcus erythropolis in E.coli .

The 4th National Biotechnology Congress Islamic Republic of Iran, 15-17 Auguest 2005,

Kerman (Mahan).

 

14- Nazari. B., Haghbeen. K., Raheb, J., Arab Najafi. S. and Fatemi, S.S. (2005).

Optimization Cholesterol Oxidase production by Rhodococcus erythropolis ATCC 4277

by using Taguchi Statistical Nethod. The 4th National Biotechnology Congress Islamic

Republic of Iran, 15-17 Auguest 2005, Kerman (Mahan).

 

15- Behzadi. H., Raheb, J., Aghaei, E. and Akbarzadeh, S. (2005). Cloning and Expression of

Oxidoreductase gene from Rhodococcus erythropolis IGTS8 for Enhancement of Biological

Desulfurization. The 4th National Biotechnology Congress Islamic Republic of Iran,

15-17 Auguest 2005, Kerman (Mahan).

 

16- Mohaghegh. A., Raheb, J., Khaniki, GH.. Akbari, M., Shabani, A and Aghaei, E., (2005).

Cloning of Glucose oxidase Aspergillus Niger in Prokariotic Host. The 4th National

Biotechnology Congress Islamic Republic of Iran, 15-17 Auguest 2005, Kerman (Mahan).

 

17- Ghaffari. S., Raheb, J., Akbarzadeh, S. and Ebrahimi, GH. (2005). Desulfurization Process

of Pesudomonas aeroginosa in presence of Biosurfactant . The 4th National Biotechnology

Congress Islamic Republic of Iran, 15-17 Auguest 2005, Kerman (Mahan).

 

18- Behzadi. H., Raheb, J., Aghayemoghadam, E. and Akbarzadeh, S. (2005). Increasing The

copy Number of Oxidoreductase gene for Importante the Expression of Desulfurization

Genes. 13th Iranian biology Conference and the first International Conference of Biology

Guilan University, Rasht, I.R.Iran, 23-25 august 2005.

 

19- Raheb, J., Mohaghegh. A., Akbari, M., Shabani, A., Khodabandeh, M and Karkhanei,

A. (2005). Cloning and Expression of Glucose Oxidase Aspergillus niger in E.coli.

13th Iranian biology Conference and the first International Conference of Biology Guilan

University, Rasht, I.R.Iran, 23-25 august 2005.

 

20- Rasehk, B., Mosavi, MT. and Raheb, J.(2006). Investigation of Biodesulfurization operon

activity in the Rhodococcus Erytheropolis IGTS8 influence of Oxidoreductase gene.

14th National and 2th InternationalConfrence of Biology Tarbiat Modares University,

Tehran, Iran, 2006.

 

21- Yektamaram, L., Raheb, J., Akbari, Shaabani, A., M and Aghaei, E.(2004), Isolation

and cloning of Glocose oxidase gene from Aspergillus niger In Ecoli. The 3th National

Biotechnology Congress Islamic Republic of Iran, 11-13 September 2004, Mashhad

 

21- Akbarzadeh, A., Raheb, J.,(2004),Determination of genetic map and Nucleotide sequences

of dszAB in Rhodococcus FMF a native bacteria in IRAN. The 3th National Biotechnology

Congress Islamic Republic of Iran, 11-13 September 2004, Mashhad

  

23- Jamshid Raheb; Hasan khoshroo; Ali Azimi; Bahram Nasernejad; Mohammad

hossein Sanati; Mahmood Arabnezhad (2007). Isolation and Characterization of a new

Acidothiobacillus Ferrooxidans from the Aliabad copper mine in Yazd using 16s-23s

spacer gene nucleotide sequencing method. II International Conference Environmental

Industrial and Applied Microbiology(BioMicroWorld-2007). 28 November -1December 2007,

Seville , Spain.

 

24- Jamshid Raheb; Hasan khoshroo; Ali Azimi; Bahram Nasernejad; Mohammad

hossein Sanati; Mahmood Arabnezhad (2007). Isolation and characterization of novel

fastidious, acidophilic species from the Aliabad copper mine in Yazd using 16s-23s

intergenic, spacer gene nucleotide sequencing method . II International Conference

Environmental Industrial and Applied Microbiology(BioMicroWorld-2007). 28 November –

1December 2007, Seville , Spain.

 

Gene Submission 1- AJ514873.3

2- AJ514949.2

3- AJ514947.2

4- AJ514948.1

5- AJ973326.1

6- AJ973325.1

7- AJ973323.1

8- AJ973324.1

9- AM039687.1

10- AM039688.1

11- AM296495

12- AM296496

13- AM296497

14- AM296498

15- AM296499

16- AM404265

17- AM404266

18- AM404267

19 - AM404268

20- AM404269

21- AM404270

22- AM404271

23- AM404272

24- AM404273

25- AM404274

26- FM946026

27- FM946027

Patents

     

1- 38302003

2- 38302004

3- 38302005

4- 38303079

  

1- Khosrow Adeli

Dept of Pediatric

Laboratory Medicine professor

University Of Toronto

555 University Ave

Toronto, Ontario

Canada M5G 1X8

Email: khosro.adeli@sickkids.ca

www.sickkids.ca

Tel: (416) 813 8682

Pager: (416) 232 4150

Fax: (416) 813 6257

  

2- Hojatollah Vali Ph.D.

Director

Faculty for Electron Microscopy Research

McGill University

3640 University Street

Montreal, OC H3A 2B2

Email: hojatollah.vali@mcgill.ca

www.medicine.mcgill.ca /femr

Tel: (514) 398 3025

Fax: (514) 398 5047

        

3- Nasser Khodai Booran Ph. D

The Hospital for Sick Children

Division Of Infection Diseases

Researcher

555 University Ave

Toronto, Ontario

Canada M5G 1X8

Email: nkhodaibooran@yahoo.com

Nasser.khodaibooran@sickkids.ca

Tel: (416) 813 6009

Pager: (416) 232 4150

Fax: (416) 813 5993

   

 

JAMSHID RAHEB

9041 YONGE ST,

RICHMOND HILL,

ON, CANADA,

L4C 0L2

jamshid_raheb@yahoo.com

jam@nigeb.ac.ir

(905)886-2338

(416) 587-3032

 

:

Enclosed please find my resume;

I graduated from the University of Warwick from United Kingdom in May 1998 with a PhD Degree in molecular microbiology. My major was Genetic Engineering. As you will see from my resume, in addition to meeting the demands of a full-time academic schedule, I have also accumulated fifteen years of experience in biotechnology research.

Sincerely,

 

Jamshid Raheb

                          

Jamshid Raheb

 

PersonalDate and Place of Birth: March 17-1962 – Tehran – IRAN

Marital Status: Single

ObjectiveSearching, learning and teaching

Education

                                         

Research work

                        

Ph. D in Molecular Microbiology

1994-1998 The University of Warwick ,U.K. ENGLAND

 

-Thesis: The molecular and physiological effects of starvation and other stresses on

Flexibacter chinensis

Average grade: A+

 

For many years physiological, morphological and particularly molecular studies on

gliding bacteria were impossible due to the lack of a suitable technique for the genetic

manipulation of this group of bacteria including Flexibacter chinensis. Our study has focused

on the physiological and morphological changes in molecular level in this organism during

the transition from the exponential to stationary phase of growth, and during long -term stress

condition. Our data demonstrate that there is a dramatic change in respiration activity and

enzymes during the stationary phase which can not be seen in the exponential phase.

Parallel to this bacterial morphology changes with a particularly noticeable size

reduction in this usually filamentous bacterium. With the collaboration of Wisconsin

University in USA we have developed a method for the molecular study of this group of bacteria.

We have constructed two mutants for the genes which produce two novel sigma factors, KatF(sS)

and RpoH(s32), and have investigated the effect of these mutants with respect to cell size

changes during the transition from growth to starvation conditions and under heat stress.

The mutants were unable to change from the filamentous to coccoidal form and consequently

were unable to survive stress as effectively as the parental strain which could undergo

morphological changes. Our data have demonstrated the importance of cell division in

Flexibacter chinensis for the survival of this bacterium under stress conditions.

  

Master of Science (M.Sc) in Bacteriology

1987-1991, Tarbiat Modarres University, Tehran, IRAN

Average grade: 17.62 / 20

-Thesis: Investigation of fastidious E. coli in the urinary tract infections

Thesis Grade: 19.50 / 20

Bachelor of Science in Biology (B.Sc) in Microbiology

Aug. 1983 – Jul. 1987, Tehran University , Tehran, IRAN

Average grade: 17.60 / 20

   

The Microbial sulfur-specific transformation which selectively desulfurize organic sulfur compounds in fossil fuels, has been identified. We have Identified, Isolated, cloned and sequenced a 4kb gene locus from a newly isolated Iranian strain Rhodococcus FMF(4S pathway genes) on a broad host range plasmid with integration ability in chromosome of gram negative bacteria. This was reported for the first time as chromosomal conserved dsz genes from 4S pathway in Rhodococcus which these genes recorded in EMBL(1,2,3,4). This organized as one operon with three genes (dszA, dszB and dszC)under the control of single promoter. The dsz gene from this new strain has been cloned under control of tac promoter in different pseudomonas solvent tolerant species(ATCC 9027). We have applied an industrial microorganism , with the ability in biological desulfurization. In this way, using molecular and microbiological techniques we successfully constructed a manipulated bacterium with two relevant industrial application, that is biosurfactant production and desulfurization of fossil fuel. I have selected a strain of pseudomonas. Sp. which is producing biosurfactants which can help the desulfurization process by accelerating phase separation. In this regard I have cloned Rhodococcus Erytheropolis(IGTS8) desulfurization operon with a heterologues promoter(tac) in this pseudomonas strain. The resulted construct has three industrial traits. First, it has an enhanced desulfurization activity due to the exchange of native promoter with heterologues tac promoter. Second, it can produce biosurfactants which in turn help to desulfurization process by enhancing phase separation. Third, as pseudomonas Sp. is the most known solvent tolerance bacteria, this construct has the advantage to be used in industrial operation. In further step I am going to conduct a research on likely interactions between Rhamnolipid biosurfactants and oil components. Further researches is in progress to find out the influence of the biosurfactants on DBT desulfurization. By the way I am to appreciate the close cooperation of Dr Diaz from Spain. This is the new alternatives to commercialize the biodesulfurization of crude oil processes.

LanguagesEnglish, Turkish and Farsi.

Skills

  

Molecular cloning, Polymerase chain reaction (PCR), DNA sequencing, Southern hybridization, Northern hybridization, Western blots, DNA separation techniques, Two-dimensional gel electrophoresis (2D Gels) DNA library, Over-expression of proteins, MALDI-TOF.

Work Experience

  

National Institute for Genetic Engineering and Biotechnology (NIGEB) of IRAN. March 1998 – 2007 (Dept. of Microbiology), Member of Faculty Board ,

Principal Investigator (PI) several research projects

Teaching the course units related to Molecular Microbiology and Biotechnology

Workshop attended“Good Laboratory Practice (GLP)”, NIGEB, Sep.(17-19) 2000, Tehran-IRAN

“Cloning in bacterial expression system for production of recombinant protein” Organized by

NIGEB, Jan (18-22) 2003. Tehran- IRAN

“Application of Enzymes in Biotechnology” Organized by NIGEB, Dec (23-27)

2006. Tehran – IRAN

Papers1- Raheb, J. and Yakhchali, B. (2002). Genetic analysis of biodesulfurizing bacteria isolated

in IRAN. Journal of Sciences IslamicRepublic of Iran, 11, No 3 and 4, 1-12.

 

2- Akbarzadeh, A., Raheb, J., Aghaei, E. and Karkhane, A. (2003). Study ofDesulfurization rate

in Rhodococcus FMF Native Bacterium, Iranian Journal of Biotechnology , 1, 1, 36-40.

   

3- Kazemi, M and Raheb, J. (2004), Isolation and Identification of a Sulfide/Sulfoxide

Monooxigenase Gene from a Newly Isolated Rhodococcus Sp, Strain FMF. Journal of Sciences,

Islamic Republic of Iran, 15, 2, 119-126.

 

4- Naghdi, S., Raheb, J., Yakhchali, B. and Aghaei, E. (2004). Cloning of Desulfurization Operon

of 4S pathway in Pseudomonas.(In Persian Language), Journal of Science ( Tehran University),

30, 389-391.

 

5- Akbarzadeh, A., Raheb, J., Rastegar, Jazi, (2004). Cloning and sequencing of desulfurization

Operon from a Newly Isolated Bacterium Rhodococcus FMF, Iranian Journal of Biotechnology ,

Vol 2, No.1, 19-24

 

6- Raheb, J., Yektamaram, L., Shaabani, A., Akbari, M and Aghaei, E.(2004), Isolation and

cloning of Glocose oxidase gene from Aspergillus niger In Ecoli. Koomesh Journal of semnan

University of Medical Sciences, 5, 1&2, 29-36.

 

7- Akbarzadeh, A., Raheb (2004). Identification and Cloning of desulfurization Operon (dszAB)

from a Native Bacterium Rhodococcus FMF, . Koomesh Journal of semnan University of

Medical Sciences, Spring & Summer 2004,Vol.5, No. 3&4, 171-178.

 

8- Raheb, J., Mohaghegh. A., Akbari, M., Shabani,and Aghaee, E (2005). Cloning of

Glucose oxidase gene in pkk233-3. . Koomesh Journal of semnan University of

Medical Sciences, Vol 6, No 3, 217-222.

 

9- Raheb, J., Naghdi, S., Yakhchali, B., (2005). Designing a new Recombinant strain with

additional copy number to enhance biodesulfurization activity in Pseudomonas

aeruginosa ATCC9027. Iranian Journal of Science & Technology, 29, 195-199.

 

10- Raheb, J., Karkhane, A.A., Naghdi, S., Flint, K., (2005). The mutation of the rpoS gene,

the central regulator of stationary phase, affects the cell division in Flexibacter chinensis,

Journal of Sciences,16, 209-215.

 

11- Raheb, J. Naghdi, S. and Flint, K.P. (2006). "De novo protein production under long

term starvation in Flexibacter chinensis". Mendez-Vilas, Proceedings Book titled "Modern

Multidisciplinary Applied Microbiology, 50-54.

 

12- Raheb, J., Aghaei, E. S., Ghorbanli, M., Khanyeki, G., and Naghdi,(2006).

Identification and cloning of oxidoreductase gene from Rhodococcus erythropolis in

E.coli. Koomesh Journal of semnan University of Medical Sciences, 6, 4, 325-334.

 

13- Raheb, J. Naghdi, S. and Flint, K.P. (2006). Alkaline phosphatase activity of Flexibacter

chinensis under starvation stress in strile water microcosoms. special issue of the Enzyme and

Microbial Technology journal, 40, 13-16.

 

14- Raheb, J., Naghdi, S. and Flint, K.(2006). The effect of starvation factor on the survival

characteristics of Flexibacter chinensis, Iranian Journal of Science & Technology.

Transaction A. Vol. 31, No. A1, 117-121

 

15- Raheb, J., Naghdi, S. and Flint, K.(2006). The effect of some environmental factors

on the survival characteristics of Flexibacter chinensis. Journal of Sciences.

Islamic Republic of Iran, 17, 2, 317-322.

 

16- Raheb, J., Naghdi, S. and Flint, K.(2007). Respiration Activity in Flexibacter chinensis under

Starvation Stress, Iranian Journal of Science & Technology. Transaction A, Vol. 31, No.A3, 1-10

  

17- Raheb, J., Naghdi, S. Karkhane, A.A., Yahkchali , B., and Flint, K.P. (2004).

nucleotide sequence of dszC Gene from a Newly Isolated Rhodococcus FMF, Shiraz

E -Medical Journal, 5, 2.

 

18- Raheb, J., Naghdi, S. and Flint, K. (2006). Heat-Induced Synthesis of δ32 in Flexibacter

chinensis: The Role and Function in cell division, Journal of Chemistry and Chemical

Engineering, 18, 2, 115-121.

 

19- Raheb, J., Naghdi, S. and Flint, K.(2008). The effect of starvation stress on the protein profiles in

Flexibacter chinensis. Iranian biomedical Journal .12, 2, 67-77

 

20- Akbari Noghabi, K., Shahbani Zahiri, H., Raheb, J., Nasri, S. and Chul Yun, S.(2007).

The Survey of Mercury Obsorption by pseudomonas flourescens BM07 grown at two different

Temperature, Microbiological Research, 56, NO 2, 111-117.

 

21- Raheb, J., khoshroo., H , Nasernejad., B, Sanati., M,H, Azimi., A, Naghdi., S. and

Arabnezhad., M..(2006). Isolation and Characterization of a new Acidothiobacillus

Thiooxidans from the Aliabad copper mine in Yazd using 16s-23s spacer gene nucleotide

sequencing method, Journal of Chemistry and Chemical Engineering.

 

22- Raheb, J., khoshroo, H., Nasernejad, B., Sanati, MH., Azimi, A., Naghdi,

S. and Arabnezhad, M..(2007). Isolation and Characterization of a new Acidothiobacillus

Ferrooxidans from the Aliabad copper mine in Yazd using 16s-23s spacer gene nucleotide

sequencing method, Journal of Sciences, Islamic Republic of Iran, 18(3): 209-213

 

23- Barzegar, F., Raheb. J. and Mosavi, M.L. (2007). Cloning and expression of SOX(dsz A B, C)

Operon in Ecoli Strain DH5a and comparison its desulfurization activity with pseudomonas aeroginosa

EGSOX, Pseudomonas putida EGSOX and Ecoli cc118 lambda pir,. Koomesh Journal of semnan University

of Medical Sciences, Spring & Summer 2007,Vol.8, No. 2, 1-15.

 

24- Raheb, J., Aghaei, E. S. and Behzadi, H,(2008), Enhansment of Biodesulfurization activity via the overexpression of the oxidoreductase gene from R.Eytheropolis IGTS8 using pet21a vector, Koomesh Journal of semnan University

of Medical Sciences, Winter 2008,Vol.9, No. 2, 1-15, 99-105.

 

25- Shourian, M., Akbari Noghabi, K., Shahbani Zahiri, H., Bagheri, T., Karballaei, G.,

Mollaei, M., Rad, I., Ahadi, S., Raheb. J. and Abbasi, H. (2008). DES 5233 Efficient

Phenol-degradation by a newly characterized Pseudomonas sp. SA01 isolated from pharmaceutical

Wastewaters. Desalination Journal

 

Presentations1- Raheb, J., Aghaei, E., Naghdi, S. and Yakhchali, B. (2001). Cloning and Expression of

desulfurization Operon in Pseudomonas aeroginusa to Enhance Biodesulfurization Rate in Fossil

Fuels, 2th National Biotechnology Congress IslamicRepublicof Iran, Oct. 9-11 2001, Karaj

Agricultural Biotechnology Research Institute of Iran

 

2- Hosseini, Sayyedabolfazl., Yakhchali, B., Sattari. Morteza and Raheb, J. (2001). Cloning of

DNA Fragment Encoding NSP4 Epitope of Rotavirusin CS3Fimberial Subunit Gene of

Enterotoxigenic E.coli, 2th NationalBiotechnology Congress IslamicRepublicof Iran, Oct.

9-11 2001, Karaj Agricultural Biotechnology Research Institute of Iran

 

3- Raheb, J. and Yakhchali, B. (2002). Genetic analysis of biodesulfurizing bacteria isolated in

IRAN. Ninth Iranian Biology Conference, Faculty of Science, University of Tehran, 15-17 August 2000.

 

4- Raheb, J., Akbarzadeh, S. and Flint, K.P. (2003). Consevation of chromosomal-Encoded

Dibenzothiophene desulfurization genes in a newly Isolated Bacterium Rhodococcus FMF.

10th Iranian Researchers seminar in Europe (IRSE2003), Gonville and Cauis college University

of Cambridge Cambridge 31 May, 2003

 

5- Akbarzadeh, A., Raheb, J., Aghaei, E. and Karkhane, A. (2003). Study and Compare of

Desulfurization rate in Rhodococcus FMF Native Bacterium, 7th National Iran chemical

Engineering Congress, University of Tehran 28-31 October, 2002

 

6- Raheb, J., Aghaei, E. and Naghdi, S. (2004). Identification and Cloning of

Oxidoreductase gene from Rhodococcus Erytheropolis, Proceedings of The 12th Iranian biology

Conference.

 

7- Raheb, J., Karkhane, A. and Flint, K.P. (2004). Alkaline phosphatase activity of Flexibacter

chinensis under starvation stress in strile water microcosoms. 1tst International Conference on

Environmental , Industrial and Applied Microbiology(BioMicroWorld-2005). March

5-18th 2005, Badajoz, Spain

 

8- Raheb, J., Karkhane, A. and Flint, K.P. (2004). The effect of stress on the protein profiles in

Flexibacter chinensis. 1tst International Conference on Environmental , Industrial and

Applied Microbiology(BioMicroWorld-2005). March 15-18th 2005, Badajoz, Spain.

 

9- Raheb, J., Karkhane, A. and Flint, K.P. (2004). Heat-Induced Synthesis of δ32 in

F. chinensis: The Role and Function in cell Division . 1tst International Conference

on Environmental , Industrial and Applied Microbiology(BioMicroWorld-2005).

March 15-18th 2005, Badajoz, Spain.

 

10- Raheb, J., Karkhane, A. and Flint, K.P. (2004). Respiration Activity in Flexibacter chinensis

under Starvation Stress 1tst International Conference on Environmental , Industrial and

Applied Microbiology(BioMicroWorld-2005). March 15-18th 2005, Badajoz, Spain.

 

11- Raheb, J., Karkhane, A. and Flint, K.P. (2004). The mutation of the ropS gene, the central

regulator of stationary phase, affects the cell division in F. chinensis 1tst International

Conference Environmental Industrial and Applied Microbiology(BioMicroWorld-2005). March

15-18th 2005, Badajoz, Spain.

 

12- Raheb, J., Karkhane, A. and Flint, K.P. (2004). The effect of environmental factors on

the survival characteristics of Flexibacter chinensis. 1tst International Conference

on Environmental , Industrial and Applied Microbiology(BioMicroWorld-2005).

March 15-18th 2005, Badajoz, Spain.

 

13- Raheb, J., Aghaei, E., Khaniki, GH.. Ghorbanly, M. and Naghdi, S. (2005). Identification

and Cloning of Oxidoreductase gene from Rhodococcus erythropolis in E.coli .

The 4th National Biotechnology Congress Islamic Republic of Iran, 15-17 Auguest 2005,

Kerman (Mahan).

 

14- Nazari. B., Haghbeen. K., Raheb, J., Arab Najafi. S. and Fatemi, S.S. (2005).

Optimization Cholesterol Oxidase production by Rhodococcus erythropolis ATCC 4277

by using Taguchi Statistical Nethod. The 4th National Biotechnology Congress Islamic

Republic of Iran, 15-17 Auguest 2005, Kerman (Mahan).

 

15- Behzadi. H., Raheb, J., Aghaei, E. and Akbarzadeh, S. (2005). Cloning and Expression of

Oxidoreductase gene from Rhodococcus erythropolis IGTS8 for Enhancement of Biological

Desulfurization. The 4th National Biotechnology Congress Islamic Republic of Iran,

15-17 Auguest 2005, Kerman (Mahan).

 

16- Mohaghegh. A., Raheb, J., Khaniki, GH.. Akbari, M., Shabani, A and Aghaei, E., (2005).

Cloning of Glucose oxidase Aspergillus Niger in Prokariotic Host. The 4th National

Biotechnology Congress Islamic Republic of Iran, 15-17 Auguest 2005, Kerman (Mahan).

 

17- Ghaffari. S., Raheb, J., Akbarzadeh, S. and Ebrahimi, GH. (2005). Desulfurization Process

of Pesudomonas aeroginosa in presence of Biosurfactant . The 4th National Biotechnology

Congress Islamic Republic of Iran, 15-17 Auguest 2005, Kerman (Mahan).

 

18- Behzadi. H., Raheb, J., Aghayemoghadam, E. and Akbarzadeh, S. (2005). Increasing The

copy Number of Oxidoreductase gene for Importante the Expression of Desulfurization

Genes. 13th Iranian biology Conference and the first International Conference of Biology

Guilan University, Rasht, I.R.Iran, 23-25 august 2005.

 

19- Raheb, J., Mohaghegh. A., Akbari, M., Shabani, A., Khodabandeh, M and Karkhanei,

A. (2005). Cloning and Expression of Glucose Oxidase Aspergillus niger in E.coli.

13th Iranian biology Conference and the first International Conference of Biology Guilan

University, Rasht, I.R.Iran, 23-25 august 2005.

 

20- Rasehk, B., Mosavi, MT. and Raheb, J.(2006). Investigation of Biodesulfurization operon

activity in the Rhodococcus Erytheropolis IGTS8 influence of Oxidoreductase gene.

14th National and 2th InternationalConfrence of Biology Tarbiat Modares University,

Tehran, Iran, 2006.

 

21- Yektamaram, L., Raheb, J., Akbari, Shaabani, A., M and Aghaei, E.(2004), Isolation

and cloning of Glocose oxidase gene from Aspergillus niger In Ecoli. The 3th National

Biotechnology Congress Islamic Republic of Iran, 11-13 September 2004, Mashhad

 

21- Akbarzadeh, A., Raheb, J.,(2004),Determination of genetic map and Nucleotide sequences

of dszAB in Rhodococcus FMF a native bacteria in IRAN. The 3th National Biotechnology

Congress Islamic Republic of Iran, 11-13 September 2004, Mashhad

  

23- Jamshid Raheb; Hasan khoshroo; Ali Azimi; Bahram Nasernejad; Mohammad

hossein Sanati; Mahmood Arabnezhad (2007). Isolation and Characterization of a new

Acidothiobacillus Ferrooxidans from the Aliabad copper mine in Yazd using 16s-23s

spacer gene nucleotide sequencing method. II International Conference Environmental

Industrial and Applied Microbiology(BioMicroWorld-2007). 28 November -1December 2007,

Seville , Spain.

 

24- Jamshid Raheb; Hasan khoshroo; Ali Azimi; Bahram Nasernejad; Mohammad

hossein Sanati; Mahmood Arabnezhad (2007). Isolation and characterization of novel

fastidious, acidophilic species from the Aliabad copper mine in Yazd using 16s-23s

intergenic, spacer gene nucleotide sequencing method . II International Conference

Environmental Industrial and Applied Microbiology(BioMicroWorld-2007). 28 November –

1December 2007, Seville , Spain.

 

Gene Submission 1- AJ514873.3

2- AJ514949.2

3- AJ514947.2

4- AJ514948.1

5- AJ973326.1

6- AJ973325.1

7- AJ973323.1

8- AJ973324.1

9- AM039687.1

10- AM039688.1

11- AM296495

12- AM296496

13- AM296497

14- AM296498

15- AM296499

16- AM404265

17- AM404266

18- AM404267

19 - AM404268

20- AM404269

21- AM404270

22- AM404271

23- AM404272

24- AM404273

25- AM404274

26- FM946026

27- FM946027

Patents

     

1- 38302003

2- 38302004

3- 38302005

4- 38303079

  

1- Khosrow Adeli

Dept of Pediatric

Laboratory Medicine professor

University Of Toronto

555 University Ave

Toronto, Ontario

Canada M5G 1X8

Email: khosro.adeli@sickkids.ca

www.sickkids.ca

Tel: (416) 813 8682

Pager: (416) 232 4150

Fax: (416) 813 6257

  

2- Hojatollah Vali Ph.D.

Director

Faculty for Electron Microscopy Research

McGill University

3640 University Street

Montreal, OC H3A 2B2

Email: hojatollah.vali@mcgill.ca

www.medicine.mcgill.ca /femr

Tel: (514) 398 3025

Fax: (514) 398 5047

        

3- Nasser Khodai Booran Ph. D

The Hospital for Sick Children

Division Of Infection Diseases

Researcher

555 University Ave

Toronto, Ontario

Canada M5G 1X8

Email: nkhodaibooran@yahoo.com

Nasser.khodaibooran@sickkids.ca

Tel: (416) 813 6009

Pager: (416) 232 4150

Fax: (416) 813 5993

   

Assistant Secretary of State for Economic, Energy and Business Affairs Jose Fernandez delivers remarks on "The Role of Biotechnology in Advancing African Agriculture,” at Chesapeake Farms in Maryland on September 14, 2011. [State Department photo/ Public Domain]

Formerly Dendrobium stricklandianum and D. tosaense

Isaiah Obara, a PhD graduate fellow researching 'T. parva genetic diversity in relation the MHC diversity of the cattle host' from January 2011 through November 2013, is located on the ILRI-Nairobi campus and supervised by ILRI's Steve Kemp and Richard Bishop (photo credit: ILRI).

2017 BIO World Congress on Industrial Biotechnology

15 February 2016, Rome, Italy - Gunter Pauli, Founder, Zero Emissions Research and Initiatives Network, Japan. FAO International Symposium on “The Role of Agricultural Biotechnologies in Sustainable Food Systems and Nutrition”, Opening Session. FAO headquarters (Green room).

 

Photo credit must be given: ©FAO/Giuseppe Carotenuto. Editorial use only. Copyright ©FAO.

Over the next five years, we will witness surge in approval of new drugs that would deliver a major improvement in the standard of care. www.bharatbook.com

Freshmen Michele San, 14, of Freehold Township and Danielle Granata, 14, of Eatontown analyze a mock crime scene during Intro to Chemistry and Forensics class at Biotechnology High School. ((STAFF PHOTO: TANYA BREEN))

 

Article Link:

www.app.com/article/20091029/LIFE/910290320/Students-inve...

if you are interested to copy this picture for publication, please write under the photo : © Novasep-Henogen SA photo by Ary

Thank you !

Els ponents de la vuitena sessió de Lessons Learned organitzada per CataloniaBio i Biocat: Miguel Ángel Mayo (Gestha), Diego Rodríguez (J&A Garrigues), Xavier Castells (Inkemia IUCT Group), Anna Rossell (IMB Grup), Inmaculada Torés (EQA), Ignasi Belda (Intelligent Pharma)

Designed for area high school teachers and conducted by JCC biology faculty. Hands-on activities included advanced lab methods and technical skills in cell culture, immunofluorescence, and DNA isolation. August 2011

Vish Nene, director of ILRI's Biotechnology Theme (photo credit: ILRI).

Students in Dr Jolene Schuster's Biotechnology Class/Lab made a series of protein samples and then measured the amount of UV light that each absorbed using a spectrophotometer. They used the data to create a standard curve relating concentration and absorbance. The curve will be a useful tool for exploring other protein samples they are studying; Gilder Center, April 22, 2022. Photography by Glenn Minshall.

Jamestown Community College hosted an intensive five-week boot camp for high school teachers in the HURI SURI program offered through JCC’s biotechnology degree program. HURI SURI provides undergraduate research opportunities for JCC and area high school students as well as opportunities for teachers to participate in biotechnology and undergraduate research experiences at JCC.

Designed for area high school teachers and conducted by JCC biology faculty. Hands-on activities included advanced lab methods and technical skills in cell culture, immunofluorescence, and DNA isolation. August 2011

An overview of the cafeteria at Biotechnology High School. Principal Linda Eno credits the school's tidy environment to the cooperation of students, faculty and an outstanding janitorial staff. (STAFF PHOTO: TANYA BREEN)

 

Article Link:

www.app.com/article/20091029/LIFE/910290325/From-clean-to...

Biotechnology Lab: Examination of Protein Structure

Intercollegiate Faculty of Biotechnology UG-MUG

Location: ul. Abrahama 58, 80-307 Gdańsk

Architect: Warsztat Architektury Pracownia Autorska Krzysztof Kozłowski

 

CONTACT ME!

 

FACEBOOK | INSTAGRAM

 

© Piotr Krajewski

FOTOGRAFIA ARCHITEKTURY | ARCHITECTURAL PHOTOGRAPHY

 

Racheal Aye, PhD student with the Contagious Bovine Pleuropneumonia (CBPP) with the Biotech theme at ILRI (photo credit: ILRI/Aye).

15 February 2016, Rome, Italy - Gunter Pauli, Founder, Zero Emissions Research and Initiatives Network, Japan. FAO International Symposium on “The Role of Agricultural Biotechnologies in Sustainable Food Systems and Nutrition”, Opening Session. FAO headquarters (Green room).

 

Photo credit must be given: ©FAO/Giuseppe Carotenuto. Editorial use only. Copyright ©FAO.

Biotechnology Lab: Examination of Protein Structure

Dr Jolene Schuster's Biotechnology labs have concentrated on DNA study during April, 2021, and she explains the lesson plan as follows: "The ability to make many copies of select regions of DNA is incredibly valuable, not just in the biochemistry lab, but also in medicine, agriculture, forensic science, evolutionary biology, and many other applications. The basic process is called the polymerase chain reaction (PCR.) Biotechnology class used PCR to amplify a short non-coding region of their own 16th chromosome to create a class genetic distribution profile. Students harvested some cells from inside their cheeks, extracted a small amount of DNA, and mixed the DNA with the right components to set up the PCR reaction. The reaction involves repeated copying of a specific target DNA sequence. The PCR products are analyzed for size and relative concentrations after the reaction. This particular non-coding region, the Alu unit at the PV92 locus, has been used to establish relatedness of individuals for many purposes." Photography by Glenn Minshall.

Dr Jolene Schuster's Biotechnology labs have concentrated on DNA study during April, 2021, and she explains the lesson plan as follows: "The ability to make many copies of select regions of DNA is incredibly valuable, not just in the biochemistry lab, but also in medicine, agriculture, forensic science, evolutionary biology, and many other applications. The basic process is called the polymerase chain reaction (PCR.) Biotechnology class used PCR to amplify a short non-coding region of their own 16th chromosome to create a class genetic distribution profile. Students harvested some cells from inside their cheeks, extracted a small amount of DNA, and mixed the DNA with the right components to set up the PCR reaction. The reaction involves repeated copying of a specific target DNA sequence. The PCR products are analyzed for size and relative concentrations after the reaction. This particular non-coding region, the Alu unit at the PV92 locus, has been used to establish relatedness of individuals for many purposes." Photography by Glenn Minshall.

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