plosone-phylo
Figure 1
The deduced peptide sequence of CmMYB1 (marked in bold) and related MYBs.a. Peptide alignment. R2 and R3 MYB DNA binding domains are shown underlined. C1 motif: LLsrGIDPX[T/S]HRX[I/L]. C2 motif: pdLNL[D/E]LXi[G/S]. C4 motif: GYDFLG[L/M]X4?7LX[Y/F][R/S]XLEMK. Zing finger motif: CX1?2CX7?12CX1?2C; b. The phylogeny of CmMYB1 and related MYBs. Bootstrap values of each branch of the derived tree are given, and the scale bar represents 0.02 substitutions per site. The genes encoding the amino acid sequences and their GenBank accession numbers are: VvMYB4a (XP_002278222), GhMYB9 (AAK19619), ZmMYB31 (NP_001105949), AtMYB4 (AAS10085), AmMYB308 (P81393), GmMYB48 (ABH02823), TaMYB1 (AAT37167), Os09g0538400 (NP_001063796), OsMYB1 (BAA23337), AtMYB32 (NP_195225), PgMYB5 (ABQ51221), HvMYB1 (P20026), HvMYB5 (CAA50221), TfMYB1 (AAS19475), ZmMYB42 (NP_001106009), AmMYB330 (P81395), AtMYB3 (NP_564176), AtMYB6 (NP_192684), EgMYB1 (CAE09058), GhMYB1 (AAN28270), TfMYB2 (AAS19476). CmMYB1 is in bold. LR: R2R3-MYB transcription factors characterized as repressors of lignin synthesis.
Figure 1
The deduced peptide sequence of CmMYB1 (marked in bold) and related MYBs.a. Peptide alignment. R2 and R3 MYB DNA binding domains are shown underlined. C1 motif: LLsrGIDPX[T/S]HRX[I/L]. C2 motif: pdLNL[D/E]LXi[G/S]. C4 motif: GYDFLG[L/M]X4?7LX[Y/F][R/S]XLEMK. Zing finger motif: CX1?2CX7?12CX1?2C; b. The phylogeny of CmMYB1 and related MYBs. Bootstrap values of each branch of the derived tree are given, and the scale bar represents 0.02 substitutions per site. The genes encoding the amino acid sequences and their GenBank accession numbers are: VvMYB4a (XP_002278222), GhMYB9 (AAK19619), ZmMYB31 (NP_001105949), AtMYB4 (AAS10085), AmMYB308 (P81393), GmMYB48 (ABH02823), TaMYB1 (AAT37167), Os09g0538400 (NP_001063796), OsMYB1 (BAA23337), AtMYB32 (NP_195225), PgMYB5 (ABQ51221), HvMYB1 (P20026), HvMYB5 (CAA50221), TfMYB1 (AAS19475), ZmMYB42 (NP_001106009), AmMYB330 (P81395), AtMYB3 (NP_564176), AtMYB6 (NP_192684), EgMYB1 (CAE09058), GhMYB1 (AAN28270), TfMYB2 (AAS19476). CmMYB1 is in bold. LR: R2R3-MYB transcription factors characterized as repressors of lignin synthesis.