plosone-phylo
pone.0018496.g007
RIF tree of plant pathogenic Enterobacteriaceae.
The rooted neighbor-joining cladogram was constructed from 74 Enterobacteriaceae strains, including 24 characterized strains of Dickeya, Pectobacterium and Pantoea from the PBC (Supplemental Table S2), eight reference strains from GenBank (see Table 1 for strain names) and the outgroup Yersinia pestis. Identical sequences are represented only once and the number of sequenced strains is indicated on each leaf. Bootstrap values >50% (shown at the node) are expressed as a percentage of 5,000 replicates. The true Erwinia species E. tasmaniensis separates from the renamed Erwinia species that branch into three different genera: Dickeya (clade A), Pectobacterium (clades G and H) and Pantoea (clade M). Red text indicates uncharacterized strains of Dickeya and green text indicates uncharacterized strains of Pectobacterium. K numbers are shown for the accessions discussed in the text (Supplemental Table S2).
pone.0018496.g007
RIF tree of plant pathogenic Enterobacteriaceae.
The rooted neighbor-joining cladogram was constructed from 74 Enterobacteriaceae strains, including 24 characterized strains of Dickeya, Pectobacterium and Pantoea from the PBC (Supplemental Table S2), eight reference strains from GenBank (see Table 1 for strain names) and the outgroup Yersinia pestis. Identical sequences are represented only once and the number of sequenced strains is indicated on each leaf. Bootstrap values >50% (shown at the node) are expressed as a percentage of 5,000 replicates. The true Erwinia species E. tasmaniensis separates from the renamed Erwinia species that branch into three different genera: Dickeya (clade A), Pectobacterium (clades G and H) and Pantoea (clade M). Red text indicates uncharacterized strains of Dickeya and green text indicates uncharacterized strains of Pectobacterium. K numbers are shown for the accessions discussed in the text (Supplemental Table S2).