plosone-phylo
pone.0018496.g003
Classifying Xanthomonas based on RIF genotypes.
The rooted neighbor-joining cladogram was constructed from 358 characterized Xanthomonas strains from the PBC (Table 2), ten reference strains from GenBank (see Table 1 for strain names) and the outgroup Xylella fastidiosa. Xanthomonas abbreviations are given in the text box. Identical sequences are represented only once and the number of sequenced strains is indicated on each leaf. Bootstrap values of >50% (shown at the node) are expressed as a percentage of 5,000 replicates. Blue boxes contain strains of different species with identical RIF sequences. X. axonopodis pv. dieffenbachiae strains are found throughout the tree (red text).
pone.0018496.g003
Classifying Xanthomonas based on RIF genotypes.
The rooted neighbor-joining cladogram was constructed from 358 characterized Xanthomonas strains from the PBC (Table 2), ten reference strains from GenBank (see Table 1 for strain names) and the outgroup Xylella fastidiosa. Xanthomonas abbreviations are given in the text box. Identical sequences are represented only once and the number of sequenced strains is indicated on each leaf. Bootstrap values of >50% (shown at the node) are expressed as a percentage of 5,000 replicates. Blue boxes contain strains of different species with identical RIF sequences. X. axonopodis pv. dieffenbachiae strains are found throughout the tree (red text).