plosone-phylo
Figure 10
Neighbor-joining bootstrap tree of CYP450 proteins in plants.Amino acid sequences of 148 plant cytochrome P450s (CYPs), including 105 sequences representative of the 10 CYP families in land plant and 41 P450s from the B. vulgaris transcriptome (marked with dots), were used to construct the phylogenetic tree. Multiple alignments were performed with Clustal W, and the tree was generated with MEGA 5. The 10 CYP clades are labeled. Bootstrap values are shown at the nodes. Al, Arabidopsis lyrata; As, Avena strigosa; At, Arabidopsis thaliana; Bs, Berberis stolinifera; Cj, Coptis japonica; Ct, Catharanthus roseus; El, Euphorbia lagascae; Gu, Glycyrrhiza uralensis; Lj, Lotus japonicas; Me, Manihot esculenta; Mi, Micromonas pusilla; Mt, Medicago truncatula; Nt, Nicotiana tabacum; Os, Oryza sativa; Ph, Petunia hybrida; Po, Populus trichocarpa; Pp, Physcomitrella patens; Pt, Pinus taeda; Py, Pyrus communis; Sb, Sorghum bicolor; Sm, Selaginella moellendorffii; Ta, Triticum aestivum; Tm, Triglochin maritime; Vs, Vicia sativa; Zm, Zea mays.
Figure 10
Neighbor-joining bootstrap tree of CYP450 proteins in plants.Amino acid sequences of 148 plant cytochrome P450s (CYPs), including 105 sequences representative of the 10 CYP families in land plant and 41 P450s from the B. vulgaris transcriptome (marked with dots), were used to construct the phylogenetic tree. Multiple alignments were performed with Clustal W, and the tree was generated with MEGA 5. The 10 CYP clades are labeled. Bootstrap values are shown at the nodes. Al, Arabidopsis lyrata; As, Avena strigosa; At, Arabidopsis thaliana; Bs, Berberis stolinifera; Cj, Coptis japonica; Ct, Catharanthus roseus; El, Euphorbia lagascae; Gu, Glycyrrhiza uralensis; Lj, Lotus japonicas; Me, Manihot esculenta; Mi, Micromonas pusilla; Mt, Medicago truncatula; Nt, Nicotiana tabacum; Os, Oryza sativa; Ph, Petunia hybrida; Po, Populus trichocarpa; Pp, Physcomitrella patens; Pt, Pinus taeda; Py, Pyrus communis; Sb, Sorghum bicolor; Sm, Selaginella moellendorffii; Ta, Triticum aestivum; Tm, Triglochin maritime; Vs, Vicia sativa; Zm, Zea mays.